BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019B01LP1|AL427425
(910 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1127 1777 0.0
>3x_Contig1127
Length = 4949
Score = 1777 bits (896), Expect = 0.0
Identities = 904/906 (99%), Gaps = 1/906 (0%)
Strand = Plus / Minus
Query: 6 aaggaaaagataccagaggtgtgaagcctcgtatcctctgagaacgcgatctatagacta 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3500 aaggaaaagataccagaggtgtgaagcctcgtatcctctgagaacgcgatctatagacta 3441
Query: 66 ctaatttattttatttatatacagttgaacttttaatgatattattattactatagtcat 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3440 ctaatttattttatttatatacagttgaacttttaatgatattattattactatagtcat 3381
Query: 126 cattcattctatcattgccttcgatccaaagtgttcatcggcaatatgattgacaactat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3380 cattcattctatcattgccttcgatccaaagtgttcatcggcaatatgattgacaactat 3321
Query: 186 ccaaccgaatgaattaacaaacctgcgacgaacaatgatgttattatgggaatcaggctg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3320 ccaaccgaatgaattaacaaacctgcgacgaacaatgatgttattatgggaatcaggctg 3261
Query: 246 tagctcaacgatgacctttctccagtccattgtctcctgccagtaccttgctattcgttc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3260 tagctcaacgatgacctttctccagtccattgtctcctgccagtaccttgctattcgttc 3201
Query: 306 ttctttcatatggatcgagtaattgggatatattatctttttcacaagcttcttatgttt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3200 ttctttcatatggatcgagtaattgggatatattatctttttcacaagcttcttatgttt 3141
Query: 366 gtagtgtttatctggtaattcttccggggtataaaccttgtcatgaataattctgtccgt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3140 gtagtgtttatctggtaattcttccggggtataaaccttgtcatgaataattctgtccgt 3081
Query: 426 tctactggagggatccactaggtacgacattcctggcagcggtgccgatattgtacttgc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3080 tctactggagggatccactaggtacgacattcctggcagcggtgccgatattgtacttgc 3021
Query: 486 agcagcttgcaatgtatttgccttttttggaggtttgaaagtagttggagagtcagaatt 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3020 agcagcttgcaatgtatttgccttttttggaggtttgaaagtagttggagagtcagaatt 2961
Query: 546 attgttcgaatcactactggcagattctaccgaactggtagtttgagtccgcacatacgg 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2960 attgttcgaatcactactggcagattctaccgaactggtagtttgagtccgcacatacgg 2901
Query: 606 tttatatttttcctttttaatgagtgactggggcagcaaccattggagaatagacttatt 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2900 tttatatttttcctttttaatgagtgactggggcagcaaccattggagaatagacttatt 2841
Query: 666 gtccgaagagctctctggaatttcccccaaagatgaccctttctgttcttcaactccctc 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2840 gtccgaagagctctctggaatttcccccaaagatgaccctttctgttcttcaactccctc 2781
Query: 726 ctcagattgggcattgttttcgctcctcacctgttgcacatcacttaaacctctccaatc 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2780 ctcagattgggcattgttttcgctcctcacctgttgcacatcacttaaacctctccaatc 2721
Query: 786 aagatatagtaaagcagccgtccttagaggcactataccatcaaatgcgacattagcata 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2720 aagatatagtaaagcagccgtccttagaggcactataccatcaaatgcgacattagcata 2661
Query: 846 cacggttctacacttkaatcgttgg-aaacttctaacgccggatgtttaggtaaaagctc 904
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2660 cacggttctacacttgaatcgttggaaaacttctaacgccggatgtttaggtaaaagctc 2601
Query: 905 taatat 910
||||||
Sbjct: 2600 taatat 2595
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6927
Number of Sequences: 1807
Number of extensions: 6927
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 910
length of database: 10,358,551
effective HSP length: 16
effective length of query: 894
effective length of database: 10,329,639
effective search space: 9234697266
effective search space used: 9234697266
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)